- Viral:
- CMV colitis, also causes CMV esophagitis
- Bacterial:
- Campylobacter, Salmonella, Shigella, Clostridium difficile, Mycobacterium avium complex (MAC), tuberculosis
- Protozoal:
- Cryptosporidium (no real treatment available)
- Entamoeba histolytica (amoebic dysentery, look for liver abscess as well)
- Giardia (watery diarrhea, often prolonged, with bloating, gas and malabsorption; upper GI symptoms w/ lower GI symptoms; risk factors: anal sex and drinking "pure" mountain water)
- Isospora, microsporidia
- HIV-associated malabsorption
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